STRINGSTRING
fdxA fdxA fdxB fdxB icd icd uspA3 uspA3 cg3274 cg3274 mdh mdh ldh ldh cg3276 cg3276 fprA fprA cysJ cysJ Cgl2570 Cgl2570
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdxAFERREDOXIN; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)    
Predicted Functional Partners:
fdxB
FERREDOXIN.
     
 0.923
icd
ISOCITRATE DEHYDROGENASE; Belongs to the monomeric-type IDH family.
  
  
 0.726
uspA3
UNIVERSAL STRESS PROTEIN FAMILY.
   
  
 0.704
cg3274
Site-specific recombinases, DNA invertase Pin homolog-fragment.
  
    0.542
mdh
MALATE DEHYDROGENASE OXIDOREDUCTASE PROTEIN; Catalyzes the reversible oxidation of malate to oxaloacetate. Exhibits higher catalytic efficiency for oxaloacetate reduction than for malate oxidation in vitro. Almost equally active both for NADH and NADPH on the bases of the kcat values at pH 6.5, but catalytic efficiency for oxaloacetate reduction is 50-fold higher with NADH.
  
  
 0.509
ldh
L-LACTATE DEHYDROGENASE; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
  
 0.509
cg3276
Hypothetical protein predicted by Glimmer/Critica.
       0.497
fprA
PUTATIVE FERREDOXIN/FERREDOXIN-NADP REDUCTASE.
  
 
 0.462
cysJ
Probable Sulfite Reductase (Flavoprotein).
  
 
 0.462
Cgl2570
Predicted TIM-barrel enzyme, possibly dehydrogenase, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
   
    0.444
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
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