Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cgl0548 | gltB | cg0639 | cg0229 | FERREDOXIN REDUCTASE. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.571 |
Cgl0548 | hemD | cg0639 | cg0510 | FERREDOXIN REDUCTASE. | UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE. | 0.530 |
Cgl0548 | qcrA2 | cg0639 | cg3369 | FERREDOXIN REDUCTASE. | RIESKE IRON-SULFUR PROTEIN. | 0.878 |
Cgl2709 | gltB | cg2999 | cg0229 | PUTATIVE FERREDOXIN REDUCTASE. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.571 |
Cgl2709 | hemD | cg2999 | cg0510 | PUTATIVE FERREDOXIN REDUCTASE. | UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE. | 0.530 |
Cgl2709 | qcrA2 | cg2999 | cg3369 | PUTATIVE FERREDOXIN REDUCTASE. | RIESKE IRON-SULFUR PROTEIN. | 0.879 |
Cgl3038 | Cgl3039 | cg3367 | cg3368 | ABC-type multidrug transport system, ATPase component. | ABC-transporter permease protein. | 0.987 |
Cgl3038 | qcrA2 | cg3367 | cg3369 | ABC-type multidrug transport system, ATPase component. | RIESKE IRON-SULFUR PROTEIN. | 0.802 |
Cgl3038 | rmpA | cg3367 | cg3366 | ABC-type multidrug transport system, ATPase component. | Putative ribitol-specific enzyme II of PTS system. | 0.528 |
Cgl3039 | Cgl3038 | cg3368 | cg3367 | ABC-transporter permease protein. | ABC-type multidrug transport system, ATPase component. | 0.987 |
Cgl3039 | qcrA2 | cg3368 | cg3369 | ABC-transporter permease protein. | RIESKE IRON-SULFUR PROTEIN. | 0.808 |
Cgl3039 | rmpA | cg3368 | cg3366 | ABC-transporter permease protein. | Putative ribitol-specific enzyme II of PTS system. | 0.520 |
gltB | Cgl0548 | cg0229 | cg0639 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | FERREDOXIN REDUCTASE. | 0.571 |
gltB | Cgl2709 | cg0229 | cg2999 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | PUTATIVE FERREDOXIN REDUCTASE. | 0.571 |
gltB | hemD | cg0229 | cg0510 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE. | 0.622 |
gltB | narJ | cg0229 | cg1342 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | NITRATE REDUCTASE DELTA CHAIN. | 0.581 |
gltB | qcrA2 | cg0229 | cg3369 | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | RIESKE IRON-SULFUR PROTEIN. | 0.605 |
hemD | Cgl0548 | cg0510 | cg0639 | UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE. | FERREDOXIN REDUCTASE. | 0.530 |
hemD | Cgl2709 | cg0510 | cg2999 | UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE. | PUTATIVE FERREDOXIN REDUCTASE. | 0.530 |
hemD | gltB | cg0510 | cg0229 | UROPORPHYRINOGEN III SYNTHASE/METHYLTRANSFERASE. | GLUTAMINE 2-OXOGLUTARATE AMINOTRANSFERASE LARGE SU. | 0.622 |
page 1 of 3