STRINGSTRING
rpmH rpmH cg0494 cg0494 rplR rplR rpsF rpsF rpmI rpmI rpsL rpsL rplM rplM rpsI rpsI rpsO rpsO rpsP rpsP rpsT rpsT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmH50S RIBOSOMAL PROTEIN L34; Belongs to the bacterial ribosomal protein bL34 family. (47 aa)    
Predicted Functional Partners:
cg0494
Extremely conserved hypothetical protein.
   
   0.999
rplR
50S RIBOSOMAL PROTEIN L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
   
   0.999
rpsF
RIBOSOMAL PROTEIN S6; Binds together with S18 to 16S ribosomal RNA.
  
 
 0.999
rpmI
50S RIBOSOMAL PROTEIN L35; Belongs to the bacterial ribosomal protein bL35 family.
  
 
 0.997
rpsL
RIBOSOMAL PROTEIN S12; With S4 and S5 plays an important role in translational accuracy.
   
 
 0.996
rplM
RIBOSOMAL PROTEIN L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
  
 
 0.996
rpsI
30S RIBOSOMAL PROTEIN S9; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.996
rpsO
RIBOSOMAL PROTEIN S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA.
   
 
 0.996
rpsP
30S RIBOSOMAL PROTEIN S16; Belongs to the bacterial ribosomal protein bS16 family.
   
 
 0.996
rpsT
30S RIBOSOMAL PROTEIN S20; Binds directly to 16S ribosomal RNA.
  
 
 0.996
Your Current Organism:
Corynebacterium glutamicum
NCBI taxonomy Id: 196627
Other names: C. glutamicum ATCC 13032, Corynebacterium glutamicum ATCC 13032, Corynebacterium glutamicum str. ATCC 13032, Corynebacterium glutamicum strain ATCC 13032
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.