STRINGSTRING
fecR8 fecR8 fecI8 fecI8 fecI7 fecI7 fecI1 fecI1 fecI2 fecI2 fecI6 fecI6 fecI9 fecI9 fecI13 fecI13 fecI14 fecI14 fecI15 fecI15 fecI16 fecI16
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fecR8Fe2+-dicitrate sensor, membrane component. (329 aa)    
Predicted Functional Partners:
fecI8
RNA polymerase sigma-70 factor, ECF subfamily.
 
   0.954
fecI7
RNA polymerase sigma-70 factor, ECF subfamily.
 
   0.861
fecI1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.805
fecI2
Uncharacterized conserved protein; Putative transmembrane protein, predicted flavoprotein; Belongs to the sigma-70 factor family. ECF subfamily.
  
   0.805
fecI6
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.805
fecI9
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.805
fecI13
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.805
fecI14
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.805
fecI15
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.805
fecI16
RNA polymerase sigma-70 factor, ECF subfamily.
  
   0.805
Your Current Organism:
Janthinobacterium sp. Marseille
NCBI taxonomy Id: 375286
Other names: J. sp. Marseille, Minibacterium massiliensis
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