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nirD2 nirD2 nirC nirC nirF nirF nirN nirN nirJ nirJ nirH nirH nirS nirS norB norB norC norC nirM nirM nosZ nosZ
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
nirD2Assimilatory nitrite reductase, small subunit; silverDB:HdN1F4929. (345 aa)    
Predicted Functional Partners:
nirC
Heme biosynthesis protein NirC; silverDB:HdN1F4931.
 
  
 0.979
nirF
Heme D1 biosynthesis protein, potentially involved in cofactor synthesis for nitrite reductase; silverDB:HdN1F4930.
 
  
 0.978
nirN
Heme-binding protein (nitrite reductase protein N); silverDB:HdN1F4926.
 
  
 0.977
nirJ
Heme D1 biosynthesis protein; silverDB:HdN1F4927.
 
  
 0.959
nirH
Heme D1 biosynthesis protein; silverDB:HdN1F4928.
 
   
0.910
nirS
Dissimilatory cytochrome cd1 nitrite reductase precursor; silverDB:HdN1F4933.
 
  
 0.878
norB
Nitric-oxide reductase subunit B; silverDB:HdN1F4938; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.713
norC
Nitric-oxide reductase subunit C; silverDB:HdN1F4940.
 
  
 0.689
nirM
Cytochrome c, monohaem; silverDB:HdN1F4932.
  
  
 0.604
nosZ
Nitrous-oxide reductase; silverDB:HdN1F5003.
  
  
 0.600
Your Current Organism:
gamma proteobacterium HdN1
NCBI taxonomy Id: 83406
Other names: g. proteobacterium HdN1
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