STRINGSTRING
CUQ66829.1 CUQ66829.1 CUQ66832.1 CUQ66832.1 CUQ66833.1 CUQ66833.1 CUQ66834.1 CUQ66834.1 CUQ66828.1 CUQ66828.1 CUQ65706.1 CUQ65706.1 amoA amoA amoB amoB amoC3 amoC3 amoC2 amoC2 amoC1 amoC1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ66829.1Conserved membrane protein of unknown function, putative OrfM; Homologs of previously reported genes of unknown function. (269 aa)    
Predicted Functional Partners:
CUQ66832.1
Conserved exported protein of unknown function, putative AmoD2; Homologs of previously reported genes of unknown function.
 
     0.841
CUQ66833.1
Conserved protein of unknown function, putative AmoD1; Homologs of previously reported genes of unknown function.
 
     0.811
CUQ66834.1
Conserved protein of unknown function, putative AmoE1; Homologs of previously reported genes of unknown function.
 
     0.801
CUQ66828.1
Protein of unknown function; No homology to any previously reported sequences.
       0.773
CUQ65706.1
Homologs of previously reported genes of unknown function.
  
     0.772
amoA
Ammonia monooxygenase, subunit A; Function of strongly homologous gene; enzyme.
  
     0.772
amoB
Ammonia monooxygenase, subunit B; Function of strongly homologous gene; enzyme.
  
     0.772
amoC3
Ammonia monooxygenase, subunit C; Function of strongly homologous gene; enzyme.
  
     0.770
amoC2
Ammonia monooxygenase, subunit C; Function of strongly homologous gene; enzyme.
  
     0.770
amoC1
Ammonia monooxygenase, subunit C; Function of strongly homologous gene; enzyme.
  
     0.770
Your Current Organism:
Nitrospira inopinata
NCBI taxonomy Id: 1715989
Other names: C. Nitrospira inopinata, Candidatus Nitrospira inopinata, Nitrospira sp. ENR4
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