STRINGSTRING
Snas_4611 Snas_4611 Snas_4612 Snas_4612 Snas_2447 Snas_2447 Snas_4613 Snas_4613
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snas_4611KEGG: bcj:pBCA036 hypothetical protein. (418 aa)    
Predicted Functional Partners:
Snas_4612
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mxa:MXAN_2715 endonuclease/exonuclease/phosphatase family protein.
  
    0.589
Snas_2447
TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: ade:Adeh_0847 SUF system FeS assembly protein.
   
 
 0.493
Snas_4613
PFAM: Haem oxygenase-like; KEGG: hypothetical protein MGC132176.
    
 0.403
Your Current Organism:
Stackebrandtia nassauensis
NCBI taxonomy Id: 446470
Other names: S. nassauensis DSM 44728, Stackebrandtia nassauensis DSM 44728, Stackebrandtia nassauensis str. DSM 44728, Stackebrandtia nassauensis strain DSM 44728
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