STRINGSTRING
pehC pehC pehB pehB garD garD RSp0832 RSp0832 pme pme egl egl RSc0131 RSc0131 RSp0831 RSp0831 hrpB hrpB exuT1 exuT1 gudP gudP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
pehCPolygalacturonase transmembrane protein; Belongs to the glycosyl hydrolase 28 family. (680 aa)    
Predicted Functional Partners:
pehB
Exo-poly-galacturonosidase signal peptide protein; Belongs to the glycosyl hydrolase 28 family.
  
   
 0.936
garD
Probable d-galactarate dehydratase (d-galactarate dehydrogenase) protein.
 
     0.832
RSp0832
Probable gluconolactonase protein.
     
 0.830
pme
Pectinesterase precursor (pectin methylesterase) (pe). transmembrane protein; Involved in maceration and soft-rotting of plant tissue. Belongs to the pectinesterase family.
   
 0.792
egl
Endoglucanase precursor (endo-1,4-beta-glucanase)(cellulase) protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
   
 0.777
RSc0131
Probable lipoprotein.
 
     0.764
RSp0831
Putative nad-dependent epimerase/dehydratase; protein.
  
    0.720
hrpB
Regulatory hrpb. transcription regulator protein; Positive regulation of hypersensitive response genes involved in plant pathogenicity and partly of its own synthesis in minimal medium.
  
   
 0.659
exuT1
Probable hexuronate transporter transmembrane protein.
 
     0.643
gudP
Putative glucarate transporter (d-glucarate permease) transmembrane protein.
 
     0.626
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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