STRINGSTRING
B3C1_11217 B3C1_11217 B3C1_11222 B3C1_11222 B3C1_07259 B3C1_07259 B3C1_12854 B3C1_12854 B3C1_06944 B3C1_06944 B3C1_11212 B3C1_11212 B3C1_00645 B3C1_00645 B3C1_18612 B3C1_18612 B3C1_06954 B3C1_06954 B3C1_12204 B3C1_12204 glyA glyA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
B3C1_11217Type IV pilus assembly PilZ; COG0001 Glutamate-1-semialdehyde aminotransferase. (121 aa)    
Predicted Functional Partners:
B3C1_11222
Hypothetical protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.
 
    
0.825
B3C1_07259
Chemotaxis protein CheR; COG1352 Methylase of chemotaxis methyl-accepting proteins.
    
   0.802
B3C1_12854
Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.
    
   0.802
B3C1_06944
DNA repair ATPase.
  
     0.553
B3C1_11212
COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.545
B3C1_00645
Hypothetical protein.
  
     0.531
B3C1_18612
Biogenesis protein MshI.
  
     0.509
B3C1_06954
CheW protein; COG0835 Chemotaxis signal transduction protein.
  
     0.448
B3C1_12204
COG1544 Ribosome-associated protein Y (PSrp-1).
  
    0.447
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
       0.444
Your Current Organism:
Gallaecimonas xiamenensis
NCBI taxonomy Id: 745411
Other names: G. xiamenensis 3-C-1, Gallaecimonas sp. 3-C-1, Gallaecimonas xiamenensis 3-C-1, Gallaecimonas xiamenensis str. 3-C-1, Gallaecimonas xiamenensis strain 3-C-1
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