STRINGSTRING
potf9 potf9 potI potI potH potH potG potG PKB_2224 PKB_2224 PKB_5079 PKB_5079 PKB_0825 PKB_0825 PKB_0333 PKB_0333 PKB_0824 PKB_0824 PKB_5570 PKB_5570 PKB_0194 PKB_0194
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potf9Putrescine-binding periplasmic protein. (370 aa)    
Predicted Functional Partners:
potI
Putrescine transport system permease protein PotI.
 
 0.969
potH
Putrescine transport system permease protein PotH.
 
 
 0.968
potG
Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.955
PKB_2224
ABC-type spermidine/putrescine transport system,permease component II.
  
 0.784
PKB_5079
Binding-protein dependent transport system inner membrane protein.
  
 0.780
PKB_0825
ABC-type spermidine/putrescine transport system,permease component II.
  
 0.773
PKB_0333
Polyamine ABC transporter permease.
  
 0.765
PKB_0824
Permidine/putrescine ABC transporter inner membrane protein.
 
  
 0.739
PKB_5570
Hypothetical protein.
  
 0.738
PKB_0194
ABC-type spermidine/putrescine transport system,permease component I.
 
  
 0.726
Your Current Organism:
Pseudomonas knackmussii
NCBI taxonomy Id: 1301098
Other names: P. knackmussii B13, Pseudomonas knackmussii B13, Pseudomonas knackmussii LMG 23759, Pseudomonas sp. (strain B13), Pseudomonas sp. B13, Pseudomonas sp. DSM 6978
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