STRINGSTRING
rsmN rsmN crsA crsA rabggtb rabggtb DDB_G0294577 DDB_G0294577 cog3 cog3 DDB_G0294583 DDB_G0294583 cog6 cog6 DDB0206402 DDB0206402 rabggta rabggta cog7 cog7 DDB_G0294569 DDB_G0294569
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsmNSmall GTPase. (219 aa)    
Predicted Functional Partners:
crsA
Ceramide synthase.
   
  
 0.884
rabggtb
Probable geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranyl-geranyl moiety from geranyl-geranyl pyrophosphate to both cysteines in Rab proteins with an -XXCC, -XCXC and -CCXX C-terminal; Belongs to the protein prenyltransferase subunit beta family.
   
 0.619
DDB_G0294577
Rab GTPase.
  
  0.609
cog3
Conserved oligomeric Golgi complex subunit 3; Required for normal Golgi function.
   
 0.594
DDB_G0294583
Ras GTPase.
  
 
  0.593
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.592
DDB0206402
Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.
    
 0.575
rabggta
Geranylgeranyl transferase type-2 subunit alpha; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to proteins with a C-terminal sequence motif -XCC or -XCXC, where both cysteines may become modified.
    
 0.570
cog7
Conserved oligomeric Golgi complex subunit 7; Required for normal Golgi function.
   
  0.562
DDB_G0294569
Rab GTPase.
  
  
  0.555
Your Current Organism:
Dictyostelium discoideum
NCBI taxonomy Id: 44689
Other names: D. discoideum
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