STRINGSTRING
sphC sphC GAT69200.1 GAT69200.1 pyrB pyrB purA purA GAT66377.1 GAT66377.1 GAT69215.1 GAT69215.1 GAT64754.1 GAT64754.1 GAT70197.1 GAT70197.1 sphB1 sphB1 sphB2 sphB2 argG argG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sphCPutative lasso peptide modification enzyme. (601 aa)    
Predicted Functional Partners:
GAT69200.1
Aspartokinase; Belongs to the aspartokinase family.
  
 
 0.897
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
  
 
 0.873
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
   
 
 0.868
GAT66377.1
Aspartate aminotransferase.
     
 0.860
GAT69215.1
Aminotransferase.
     
 0.860
GAT64754.1
Glutamate synthase.
  
 
 0.808
GAT70197.1
Aspartate racemase.
    
 0.788
sphB1
Putative lasso peptide modification enzyme.
       0.744
sphB2
Putative lasso peptide modification enzyme.
       0.744
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 0.727
Your Current Organism:
Planomonospora sphaerica
NCBI taxonomy Id: 161355
Other names: ATCC 51587, DSM 44632, JCM 9374, NRRL 18923, P. sphaerica, strain A51460
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