Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACN13752.1 | tagB1 | HRM2_06380 | HRM2_18140 | Conserved hypothetical protein. | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.460 |
ACN15691.1 | tagB1 | HRM2_25970 | HRM2_18140 | Putative fusion protein (N:peptidase-C:desuccinylase). | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.589 |
ACN16079.1 | rfbD | HRM2_29960 | HRM2_21640 | Hypothetical protein. | RfbD; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | 0.733 |
ACN16079.1 | tagB1 | HRM2_29960 | HRM2_18140 | Hypothetical protein. | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.434 |
ACN16753.1 | ACN16754.1 | HRM2_36950 | HRM2_36960 | Putative flagellin. | Putative flagellar hook-associated protein. | 0.997 |
ACN16753.1 | tagB1 | HRM2_36950 | HRM2_18140 | Putative flagellin. | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.552 |
ACN16754.1 | ACN16753.1 | HRM2_36960 | HRM2_36950 | Putative flagellar hook-associated protein. | Putative flagellin. | 0.997 |
ACN16754.1 | tagB1 | HRM2_36960 | HRM2_18140 | Putative flagellar hook-associated protein. | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.530 |
aspG | tagB1 | HRM2_18740 | HRM2_18140 | AspG; L-asparaginase AspG. | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.408 |
kdtX | msbB | HRM2_18130 | HRM2_18120 | KdtX; Lipopolysaccharide biosynthesis glycosyl transferase KdtX. | MsbB; Lipid A biosynthesis lauroyl acyltransferase MsbA. | 0.850 |
kdtX | tagB1 | HRM2_18130 | HRM2_18140 | KdtX; Lipopolysaccharide biosynthesis glycosyl transferase KdtX. | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.973 |
msbB | kdtX | HRM2_18120 | HRM2_18130 | MsbB; Lipid A biosynthesis lauroyl acyltransferase MsbA. | KdtX; Lipopolysaccharide biosynthesis glycosyl transferase KdtX. | 0.850 |
msbB | tagB1 | HRM2_18120 | HRM2_18140 | MsbB; Lipid A biosynthesis lauroyl acyltransferase MsbA. | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.779 |
rfbD | ACN16079.1 | HRM2_21640 | HRM2_29960 | RfbD; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | Hypothetical protein. | 0.733 |
rfbD | tagB1 | HRM2_21640 | HRM2_18140 | RfbD; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family. | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | 0.433 |
tagB1 | ACN13752.1 | HRM2_18140 | HRM2_06380 | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Conserved hypothetical protein. | 0.460 |
tagB1 | ACN15691.1 | HRM2_18140 | HRM2_25970 | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Putative fusion protein (N:peptidase-C:desuccinylase). | 0.589 |
tagB1 | ACN16079.1 | HRM2_18140 | HRM2_29960 | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Hypothetical protein. | 0.434 |
tagB1 | ACN16753.1 | HRM2_18140 | HRM2_36950 | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Putative flagellin. | 0.552 |
tagB1 | ACN16754.1 | HRM2_18140 | HRM2_36960 | TagB1; CDP-glycerol:glycerophosphate glycerophosphotransferase TagB1; Belongs to the UDP-N-acetylglucosamine 2-epimerase family. | Putative flagellar hook-associated protein. | 0.530 |
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