STRINGSTRING
SAL35840.1 SAL35840.1 clpP clpP clpP-2 clpP-2 SAL44715.1 SAL44715.1 SAL24360.1 SAL24360.1 SAL51600.1 SAL51600.1 SAL71163.1 SAL71163.1 dnaJ dnaJ clpS clpS SAL30163.1 SAL30163.1 SAL35827.1 SAL35827.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAL35840.1TssH-5. (243 aa)    
Predicted Functional Partners:
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 0.953
clpP-2
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 0.953
SAL44715.1
EvpB family type VI secretion protein.
 
 0.950
SAL24360.1
EvpB family type VI secretion protein.
 
 0.945
SAL51600.1
EvpB family type VI secretion protein.
 
 0.945
SAL71163.1
Molecular chaperone DnaJ.
 
 0.943
dnaJ
Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]
  
 0.932
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
 
 0.929
SAL30163.1
Chaperone protein DnaJ.
  
 0.927
SAL35827.1
Type VI secretion protein.
 
 
 0.901
Your Current Organism:
Caballeronia udeis
NCBI taxonomy Id: 1232866
Other names: Burkholderia sp. LMG 27134, Burkholderia sp. LMG 27135, Burkholderia sp. R-20941, Burkholderia udeis, Burkholderia udeis Vandamme et al. 2013, C. udeis, CCUG 63061, Caballeronia udeis (Vandamme et al. 2013) Dobritsa and Samadpour 2016, LMG 27134, LMG:27134, Paraburkholderia udeis, strain Hg2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.