STRINGSTRING
tssI-5 tssI-5 tssG-3 tssG-3 tssF-3 tssF-3 tssE-3 tssE-3 tssG tssG KOY60717.1 KOY60717.1 tssB tssB tssB-4 tssB-4 tssA tssA tssA-3 tssA-3 KOY60722.1 KOY60722.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tssI-5Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (833 aa)    
Predicted Functional Partners:
tssG-3
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.918
tssF-3
Type VI secretion system protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.910
tssE-3
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.902
tssG
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.851
KOY60717.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.839
tssB
Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.830
tssB-4
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.830
tssA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.822
tssA-3
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.822
KOY60722.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.822
Your Current Organism:
Photorhabdus heterorhabditis
NCBI taxonomy Id: 880156
Other names: ATCC BAA-2479, DSM 25263, P. heterorhabditis, Photorhabdus heterorhabditis Ferreira et al. 2014, Photorhabdus sp. Q614, Photorhabdus sp. Q614(2009), Photorhabdus sp. SF41, Photorhabdus sp. SF783, strain SF41
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