Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| B0495.8 | hrpf-1 | B0495.8a.1 | W02D3.11a.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | HnRNP F homolog. | 0.717 |
| B0495.8 | rsp-2 | B0495.8a.1 | W02B12.2.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Probable splicing factor, arginine/serine-rich 2; Plays a functionally redundant role in spermatogenesis and growth rate control. Required for the development of somatic gonad structures and for progression from larval stage to adulthood. Belongs to the splicing factor SR family. | 0.846 |
| B0495.8 | rsp-3 | B0495.8a.1 | Y111B2A.18.3 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Probable splicing factor, arginine/serine-rich 3; Plays an essential role in embryogenesis. | 0.522 |
| B0495.8 | rsp-6 | B0495.8a.1 | C33H5.12a.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Probable splicing factor, arginine/serine-rich 6; Plays a functionally redundant role in shifting germ cell sexual differentiation in hermaprodites. Required for the development of somatic gonad structures and for progression from larval stage to adulthood; Belongs to the splicing factor SR family. | 0.754 |
| B0495.8 | rsp-7 | B0495.8a.1 | D2089.1a.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Probable splicing factor, arginine/serine-rich 7. | 0.799 |
| B0495.8 | uaf-1 | B0495.8a.1 | Y92C3B.2a.1 | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | Splicing factor U2AF 65 kDa subunit; Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly (By similarity). | 0.929 |
| K07C5.6 | pabp-2 | K07C5.6.1 | C17E4.5.1 | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | RRM domain-containing protein. | 0.804 |
| K07C5.6 | rsp-2 | K07C5.6.1 | W02B12.2.1 | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | Probable splicing factor, arginine/serine-rich 2; Plays a functionally redundant role in spermatogenesis and growth rate control. Required for the development of somatic gonad structures and for progression from larval stage to adulthood. Belongs to the splicing factor SR family. | 0.858 |
| K07C5.6 | rsp-3 | K07C5.6.1 | Y111B2A.18.3 | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | Probable splicing factor, arginine/serine-rich 3; Plays an essential role in embryogenesis. | 0.861 |
| K07C5.6 | rsp-4 | K07C5.6.1 | EEED8.7a.1 | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | Probable splicing factor, arginine/serine-rich 4; May play a functionally redundant role in embryogenesis. Belongs to the splicing factor SR family. | 0.836 |
| K07C5.6 | rsp-6 | K07C5.6.1 | C33H5.12a.1 | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | Probable splicing factor, arginine/serine-rich 6; Plays a functionally redundant role in shifting germ cell sexual differentiation in hermaprodites. Required for the development of somatic gonad structures and for progression from larval stage to adulthood; Belongs to the splicing factor SR family. | 0.881 |
| K07C5.6 | rsp-7 | K07C5.6.1 | D2089.1a.1 | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | Probable splicing factor, arginine/serine-rich 7. | 0.839 |
| K07C5.6 | uaf-1 | K07C5.6.1 | Y92C3B.2a.1 | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | Splicing factor U2AF 65 kDa subunit; Necessary for the splicing of pre-mRNA. Binds to the polypyrimidine tract of introns early during spliceosome assembly (By similarity). | 0.877 |
| K07C5.6 | uaf-2 | K07C5.6.1 | Y116A8C.35a.2 | Pre-mRNA-splicing factor SLU7; Participates in the second catalytic step of pre-mRNA splicing, when the free hydroxyl group of exon I attacks the 3'-splice site to generate spliced mRNA and the excised lariat intron. Belongs to the SLU7 family. | U2AF splicing factor. | 0.820 |
| hrpf-1 | B0495.8 | W02D3.11a.1 | B0495.8a.1 | HnRNP F homolog. | Uncharacterized protein B0495.8; Belongs to the Luc7 family. | 0.717 |
| hrpf-1 | rsp-2 | W02D3.11a.1 | W02B12.2.1 | HnRNP F homolog. | Probable splicing factor, arginine/serine-rich 2; Plays a functionally redundant role in spermatogenesis and growth rate control. Required for the development of somatic gonad structures and for progression from larval stage to adulthood. Belongs to the splicing factor SR family. | 0.888 |
| hrpf-1 | rsp-3 | W02D3.11a.1 | Y111B2A.18.3 | HnRNP F homolog. | Probable splicing factor, arginine/serine-rich 3; Plays an essential role in embryogenesis. | 0.569 |
| hrpf-1 | rsp-4 | W02D3.11a.1 | EEED8.7a.1 | HnRNP F homolog. | Probable splicing factor, arginine/serine-rich 4; May play a functionally redundant role in embryogenesis. Belongs to the splicing factor SR family. | 0.833 |
| hrpf-1 | rsp-6 | W02D3.11a.1 | C33H5.12a.1 | HnRNP F homolog. | Probable splicing factor, arginine/serine-rich 6; Plays a functionally redundant role in shifting germ cell sexual differentiation in hermaprodites. Required for the development of somatic gonad structures and for progression from larval stage to adulthood; Belongs to the splicing factor SR family. | 0.904 |
| hrpf-1 | rsp-7 | W02D3.11a.1 | D2089.1a.1 | HnRNP F homolog. | Probable splicing factor, arginine/serine-rich 7. | 0.879 |
page 1 of 5