THOC5 protein (Pan troglodytes) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

THOC5

THOC5 isoform 1. (683 aa)

Predicted Functional Partners:

THOC1

0.999

THOC7

0.999

THOC2

0.999

THOC3

0.999

ALYREF

0.997

DDX39B

0.991

THOC6

0.990

ENSPTRP00000090837

0.990

NXF1

0.978

NXF5

0.950

Your Current Organism:

Pan troglodytes

NCBI taxonomy Id: 9598
Other names: P. troglodytes, chimpanzee

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALYREF	DDX39B	ENSPTRP00000089578	ENSPTRP00000054521	Aly/REF export factor.	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	0.999
ALYREF	ENSPTRP00000090837	ENSPTRP00000089578	ENSPTRP00000090837	Aly/REF export factor.	annotation not available	0.869
ALYREF	NXF1	ENSPTRP00000089578	ENSPTRP00000006511	Aly/REF export factor.	Nuclear RNA export factor 1.	0.999
ALYREF	NXF5	ENSPTRP00000089578	ENSPTRP00000056400	Aly/REF export factor.	NXF5 isoform 2.	0.978
ALYREF	THOC1	ENSPTRP00000089578	ENSPTRP00000016706	Aly/REF export factor.	THOC1 isoform 2.	0.998
ALYREF	THOC2	ENSPTRP00000089578	ENSPTRP00000038301	Aly/REF export factor.	THOC2 isoform 2.	0.987
ALYREF	THOC3	ENSPTRP00000089578	ENSPTRP00000045804	Aly/REF export factor.	THOC3 isoform 4.	0.996
ALYREF	THOC5	ENSPTRP00000089578	ENSPTRP00000040232	Aly/REF export factor.	THOC5 isoform 1.	0.997
ALYREF	THOC6	ENSPTRP00000089578	ENSPTRP00000013118	Aly/REF export factor.	THO complex 6 homolog.	0.869
ALYREF	THOC7	ENSPTRP00000089578	ENSPTRP00000026034	Aly/REF export factor.	THO complex 7 homolog.	0.954
DDX39B	ALYREF	ENSPTRP00000054521	ENSPTRP00000089578	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	Aly/REF export factor.	0.999
DDX39B	ENSPTRP00000090837	ENSPTRP00000054521	ENSPTRP00000090837	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	annotation not available	0.967
DDX39B	NXF1	ENSPTRP00000054521	ENSPTRP00000006511	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	Nuclear RNA export factor 1.	0.845
DDX39B	NXF5	ENSPTRP00000054521	ENSPTRP00000056400	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	NXF5 isoform 2.	0.439
DDX39B	THOC1	ENSPTRP00000054521	ENSPTRP00000016706	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	THOC1 isoform 2.	0.997
DDX39B	THOC2	ENSPTRP00000054521	ENSPTRP00000038301	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	THOC2 isoform 2.	0.998
DDX39B	THOC3	ENSPTRP00000054521	ENSPTRP00000045804	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	THOC3 isoform 4.	0.996
DDX39B	THOC5	ENSPTRP00000054521	ENSPTRP00000040232	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	THOC5 isoform 1.	0.991
DDX39B	THOC6	ENSPTRP00000054521	ENSPTRP00000013118	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	THO complex 6 homolog.	0.967
DDX39B	THOC7	ENSPTRP00000054521	ENSPTRP00000026034	Spliceosome RNA helicase DDX39B; Involved in nuclear export of spliced and unspliced mRNA. Assembling component of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and specifically associates with spliced mRNA and not with unspliced pre-mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm via the TAP/NFX1 pat [...]	THO complex 7 homolog.	0.990